PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000215904
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 246aa    MW: 27180.9 Da    PI: 10.9374
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000215904genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.25.2e-0976105130
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel 30 
                    l pGfrFhPt eelv +yLk+k++++   +
  MDP0000215904  76 LXPGFRFHPTHEELVIYYLKRKLSDRFSAA 105
                    579********************9886333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.32E-873101IPR003441NAC domain
PfamPF023655.4E-878181IPR003441NAC domain
Gene3DG3DSA:2.20.25.807.0E-4159178IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MEIGNVGITE VSKPTNSEAQ ISHLALDIGG SLIKLHSSKQ LRLTGYSVSS GIQRSLLDIS  60
HGSKSCLIIH QAPTALXPGF RFHPTHEELV IYYLKRKLSD RFSAAXEDVE VHCFARFVSS  120
SGGRPNDVAF GLRSTHCRRQ HSAASQNDSS GRVSALGVMI ASNGYRWRKY GKKSSEGKTG  180
SFKHTAGKWS STTMIKEFRH NXAKLFAIPL QGPNTNQAES KRKNKRKSSK HDCLLSAAEK  240
XKRGRR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.251366e-90leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.16e-10NAC domain containing protein 28